Gene name | Early vs. | Peak vs. | Peak vs. | Gene position (bp)a | Nearest and most significant SNPs of GWAS | Traits | Raw p value | ||
---|---|---|---|---|---|---|---|---|---|
dry | dry | early | Distance | Name | Position (bp)b | ||||
APOA1 | + | – | Chr15:27932198–27,934,085 | 1.77 Mb | BTB-00590603 | 29,702,877 | FY,PY,FP,PP | 7.05E-22 ∼ 4.71E-16 | |
3.59 Mb | BTB-00590405 | 31,527,773 | FY,PY | 4.12E-11 ∼ 1.22E-10 | |||||
ABCG8 | – | Chr11: 26156365–26,175,034 | 1.34 Mb | BTB-00470332 | 27,519,615 | FY,PY | 3.66E-09 ∼ 1.25E-08 | ||
1.78 Mb | BFGL-NGS-115431 | 24,379,969 | MY,FY,PY,FP,PP | 3.18E-29 ∼ 1.92E-07 | |||||
2.46 Mb | BTB-01556917 | 23,700,685 | PP | 3.46E-12 | |||||
2.56 Mb | Hapmap59290-rs29022016 | 23,599,074 | PY,PP | 1.87E-22 ∼ 7.11E-08 | |||||
3.49 Mb | BFGL-NGS-116483 | 22,666,445 | MY,FY,PY,FP,PP | 1.60E-24 ∼ 1.14E-08 | |||||
3.57 Mb | ARS-BFGL-NGS-43804 | 22,588,525 | MY,FY,PY,FP | 2.85E-26 ∼ 5.15E-08 | |||||
4.03 Mb | ARS-BFGL-NGS-100459 | 22,128,569 | FY,PY,PP | 1.03E-24 ∼ 7.98E-08 | |||||
APOC2 | + | Chr18: 53057717–53,059,957 | 888.61 Kb | BFGL-NGS-117985 | 53,948,569 | MY,FY,PY,FP,PP | 9.83E-55 ∼ 1.71E-19 | ||
910.9 Kb | Hapmap41540-BTA-43915 | 53,970,861 | FY,PY,FP | 3.07E-18 ∼ 2.19E-09 | |||||
2.83 Mb | Hapmap47618-BTA-43817 | 55,892,476 | PP | 1.07E-08 | |||||
4.11 Mb | ARS-BFGL-NGS-98028 | 57,174,711 | FY,PY,FP,PP | 1.40E-21 ∼ 1.04E-10 | |||||
APOA4 | + | + | Chr15: 27906598–27,919,592 | 1.78 Mb | BTB-00590603 | 29,702,877 | FY,PY,FP,PP | 7.05E-22 ∼ 4.71E-16 | |
3.61 Mb | BTB-00590405 | 31,527,773 | FY,PY | 4.12E-11 ∼ 1.22E-10 | |||||
SAA1 | + | + | Chr29:26696726–26,714,918 | 6.41 Kb | ARS-BFGL-NGS-24998 | 26,721,324 | PP | 2.96E-08 | |
4.19 Mb | UA-IFASA-8605 | 30,901,735 | FY,FP,PP | 1.50E-16 ∼ 1.50E-07 | |||||
PC | + | Chr29: 45508279–45,611,042 | 2.89 Mb | ARS-BFGL-NGS-2893 | 48,501,273 | FY,PY,FP,PP | 1.98E-12 ∼ 8.87E-08 | ||
3.28 Mb | Hapmap40456-BTA-66218 | 48,895,237 | FY | 1.35E-08 | |||||
3.75 Mb | BFGL-NGS-117323 | 49,357,135 | MY,FY,PY,FP | 4.32E-19 ∼ 3.58E-08 | |||||
PPP1R3B | – | Chr27: 24316623–24,317,477 | 259.32 Kb | ARS-BFGL-NGS-43776 | 24,576,801 | MY,FY,PY,FP,PP | 6.30E-26 ∼ 1.20E-07 | ||
4.07 Mb | BTB-01063707 | 28,386,241 | MY,FY,PY,FP,PP | 1.55E-45 ∼ 1.35E-17 | |||||
GALE | + | Chr2:129706509–129,711,871 | 1.27 Mb | BTA-31250-no-rs | 128,437,731 | PY,FP,PP | 1.26E-24 ∼ 3.25E-08 | ||
SDS | + | Chr17: 63302876–63,311,105 | 162.16 Kb | BFGL-NGS-110646 | 63,140,712 | FY,PY,FP,PP | 2.61E-14 ∼ 3.54E-08 | ||
230.59 Kb | Hapmap52830-rs29014800 | 63,541,690 | FP,PP | 4.31E-11 ∼ 3.38E-07 | |||||
1.41 Mb | BTB-00682411 | 61,891,068 | PP | 2.65E-08 | |||||
1.76 Mb | BTB-01992588 | 65,071,599 | MY,FY,PY | 3.55E-15 ∼ 2.01E-10 | |||||
2.93 Mb | ARS-BFGL-NGS-17192 | 66,236,750 | MY,PY | 2.97E-15 ∼ 1.30E-12 | |||||
3.31 Mb | ARS-BFGL-NGS-34106 | 66,619,908 | FY,FP,PP | 4.65E-25 ∼ 3.68E-14 | |||||
3.36 Mb | Hapmap40427-BTA-41914 | 66,671,839 | FP,PP | 6.15E-19 ∼ 3.07E-11 | |||||
FBP2 | + | + | Chr8:82396095–82,438,817 | 1.45 Mb | BTA-14515-no-rs | 83,888,935 | FY,PY,PP | 6.36E-12 ∼ 7.78E-09 | |
3.95 Mb | ARS-BFGL-NGS-20324 | 86,384,898 | FY,PY,FP,PP | 7.96E-22 ∼ 3.80E-14 | |||||
PKLR | – | Chr3:15396974–15,408,994 | 1.31 Mb | UA-IFASA-8925 | 14,084,731 | PY | 3.48E-07 | ||
SGLT1 | – | Chr17: 72690558–72,741,954 | 3.96 Mb | BTA-90512-no-rs | 68,732,546 | FP,PP | 6.81E-19 ∼ 4.33E-13 | ||
GK | + | ChrX:118110570–118,186,827 | 2.14 Mb | Hapmap34068-BES2_Contig513_1168 | 115,968,607 | MY,FY,PY,FP,PP | 2.30E-27 ∼ 6.86E-09 | ||
2.47 Mb | BTA-30585-no-rs | 120,654,979 | FY,FP,PP | 2.02E-16 ∼ 1.36E-08 | |||||
2.50 Mb | Hapmap39109-BTA-30591 | 120,691,496 | FP,PP | 6.01E-13 ∼ 1.28E-07 | |||||
2.89 Mb | Hapmap33343-BTA-111447 | 121,076,442 | FY,PY,FP,PP | 6.03E-13 ∼ 7.03E-08 | |||||
3.41 Mb | BTA-98858-no-rs | 121,600,055 | FY,FP,PP | 7.03E-21 ∼ 1.01E-09 | |||||
3.79 Mb | Hapmap45528-BTA-102311 | 114,319,576 | FY,FP,PP | 3.01E-18 ∼ 5.13E-09 | |||||
CYP7A1 | + | + | Chr14:26348324–26,358,692 | 3.76 Mb | ARS-BFGL-BAC-12159 | 22,587,081 | MY,FY,PY,PP | 4.94E-24 ∼ 6.01E-11 | |
4.41 Mb | ARS-BFGL-NGS-3198 | 21,933,950 | FY,PY,FP,PP | 1.21E-25 ∼ 1.45E-12 | |||||
ANGPTL4 | + | + | Chr7:18236482–18,243,588 | 1.84 Mb | Hapmap23865-BTA-111820 | 16,397,706 | PP | 1.51E-08 | |
4.60 Mb | BFGL-NGS-119066 | 13,632,174 | FP,PP | 9.49E-20 ∼ 7.48E-10 | |||||
4.63 Mb | ARS-BFGL-NGS-109534 | 13,608,935 | FP,PP | 8.42E-20 ∼ 1.94E-09 | |||||
4.65 Mb | BFGL-NGS-111315 | 13,584,721 | FY,PY,FP,PP | 4.90E-29 ∼ 7.03E-12 | |||||
IGF-1R | – | – | Chr21:7967718–8,268,246 | 769.19 Kb | ARS-BFGL-NGS-10704 | 9,037,431 | FP,PP | 2.60E-13 ∼ 4.77E-08 | |
1.07 Mb | ARS-BFGL-NGS-77061 | 6,900,116 | PP | 9.32E-10 | |||||
CDKN1A | – | + | Chr23:10551755–10,568,782 | 2.68 Mb | BFGL-NGS-115177 | 7,874,236 | MY,FY,PY | 1.83E-24 ∼ 6.49E-17 | |
3.28 Mb | ARS-BFGL-NGS-41214 | 13,846,320 | MY,FY,PY,PP | 2.10E-24 ∼ 3.13E-11 | |||||
4.20 Mb | ARS-BFGL-NGS-17887 | 14,769,068 | MY,FY,PY,PP | 3.76E-24 ∼ 6.86E-09 | |||||
ODC1 | + | + | Chr11:87175389–87,182,661 | 74.93 Kb | BTA-110370-no-rs | 87,257,595 | FY,PY,FP | 3.10E-12 ∼ 2.68E-07 | |
96.35 Kb | BFGL-NGS-114578 | 87,279,008 | FY,PY | 2.85E-11 ∼ 1.82E-08 | |||||
197.94 Kb | ARS-BFGL-NGS-42014 | 87,380,604 | FY | 9.34E-09 | |||||
249.36 Kb | ARS-BFGL-NGS-17731 | 86,926,025 | FY,PY,FP | 3.31E-16 ∼ 3.55E-07 | |||||
605.73 Kb | Hapmap53648-rs29021240 | 86,569,656 | FY,PY | 1.00E-10 ∼ 2.14E-08 | |||||
641.51 Kb | ARS-BFGL-NGS-70263 | 87,824,167 | MY,FY,PY,PP | 1.16E-17 ∼ 2.25E-08 | |||||
789.42 Kb | ARS-BFGL-NGS-41670 | 87,972,079 | FY,PP | 1.41E-08 ∼ 2.53E-07 | |||||
817.29 Kb | ARS-BFGL-BAC-16207 | 87,999,946 | FY,PY,FP,PP | 4.08E-10 ∼ 3.65E-07 | |||||
2.02 Mb | Hapmap52066-rs29015690 | 85,153,576 | FY | 1.10E-07 | |||||
2.16 Mb | ARS-BFGL-NGS-28030 | 89,338,824 | FY,PY | 2.08E-12 ∼ 1.33E-07 | |||||
2.19 Mb | Hapmap31724-BTA-126967 | 89,371,911 | FY,PY,FP | 1.05E-15 ∼ 1.43E-08 | |||||
2.30 Mb | ARS-BFGL-NGS-2015 | 84,872,349 | FY,PY,FP,PP | 1.83E-18 ∼ 6.84E-05 | |||||
2.35 Mb | ARS-BFGL-NGS-104652 | 84,828,071 | MY,FY,PY | 1.05E-18 ∼ 2.22E-09 | |||||
3.54 Mb | ARS-BFGL-NGS-63978 | 83,637,998 | FY,PY,FP,PP | 2.27E-15 ∼ 1.78E-07 | |||||
3.65 Mb | Hapmap40477-BTA-105881 | 83,526,455 | FY,PY,FP,PP | 1.80E-24 ∼ 2.41E-11 | |||||
4.19 Mb | Hapmap56387-rs29014077 | 82,982,779 | FY | 1.25E-07 | |||||
4.25 Mb | ARS-BFGL-NGS-93601 | 82,920,732 | FY,PY,FP,PP | 1.88E-21 ∼ 2.96E-13 | |||||
4.53 Mb | Hapmap46768-BTA-117394 | 82,643,114 | MY,FY,PY | 1.78E-13 ∼ 1.73E-07 | |||||
GADD45B | + | + | Chr7:22411968–22,414,079 | 2.24 Mb | Hapmap49309-BTA-78604 | 24,655,689 | PP | 4.34E-14 | |
LPIN1 | + | + | Chr11:86050742–86,128,538 | 2.38 Kb | ARS-BFGL-NGS-14236 | 86,048,363 | FY,PY | 1.29E-12 ∼ 4.60E-08 | |
441.12 Kb | Hapmap53648-rs29021240 | 86,569,656 | FY,PY | 1.00E-10 ∼ 2.14E-08 | |||||
797.49 Kb | ARS-BFGL-NGS-17731 | 86,926,025 | FY,PY,FP | 3.31E-16 ∼ 3.55E-07 | |||||
897.17 Kb | Hapmap52066-rs29015690 | 85,153,576 | FY | 1.10E-07 | |||||
1.13 Mb | BTA-110370-no-rs | 87,257,595 | FY,PY,FP | 3.10E-12 ∼ 2.68E-07 | |||||
1.15 Mb | BFGL-NGS-114578 | 87,279,008 | FY,PY | 2.85E-11 ∼ 1.82E-08 | |||||
1.18 Mb | ARS-BFGL-NGS-2015 | 84,872,349 | FY,PY,FP,PP | 1.83E-18 ∼ 6.84E-05 | |||||
1.22 Mb | ARS-BFGL-NGS-104652 | 84,828,071 | MY,FY,PY | 1.05E-18 ∼ 2.22E-09 | |||||
1.25 Mb | ARS-BFGL-NGS-42014 | 87,380,604 | FY | 9.34E-09 | |||||
1.70 Mb | ARS-BFGL-NGS-70263 | 87,824,167 | MY,FY,PY,PP | 1.16E-17 ∼ 2.25E-08 | |||||
1.84 Mb | ARS-BFGL-NGS-41670 | 87,972,079 | FY,PP | 1.41E-08 ∼ 2.53E-07 | |||||
1.87 Mb | ARS-BFGL-BAC-16207 | 87,999,946 | FY,PY,FP,PP | 4.08E-10 ∼ 3.65E-07 | |||||
2.41 Mb | ARS-BFGL-NGS-63978 | 83,637,998 | FY,PY,FP,PP | 2.27E-15 ∼ 1.78E-07 | |||||
2.52 Mb | Hapmap40477-BTA-105881 | 83,526,455 | FY,PY,FP,PP | 1.80E-24 ∼ 2.41E-11 | |||||
3.07 Mb | Hapmap56387-rs29014077 | 82,982,779 | FY | 1.25E-07 | |||||
3.13 Mb | ARS-BFGL-NGS-93601 | 82,920,732 | FY,PY,FP,PP | 1.88E-21 ∼ 2.96E-13 | |||||
3.21 Mb | ARS-BFGL-NGS-28030 | 89,338,824 | FY,PY | 2.08E-12 ∼ 1.33E-07 | |||||
3.24 Mb | Hapmap31724-BTA-126967 | 89,371,911 | FY,PY,FP | 1.05E-15 ∼ 1.43E-08 | |||||
3.41 Mb | Hapmap46768-BTA-117394 | 82,643,114 | MY,FY,PY | 1.78E-13 ∼ 1.73E-07 | |||||
4.21 Mb | ARS-BFGL-NGS-105586 | 81,845,043 | FY,PY,FP | 2.47E-15 ∼ 3.00E-08 | |||||
4.23 Mb | ARS-BFGL-NGS-52709 | 81,819,453 | FY,PY,FP,PP | 3.01E-25 ∼ 1.28E-08 | |||||
DUSP1 | + | Chr20:4449106–4,452,189 | 44.19 Kb | ARS-BFGL-NGS-48030 | 4,496,376 | PP | 2.07E-08 | ||
53.45 Kb | Hapmap54098-rs29010434 | 4,395,656 | FY,PY,PP | 1.35E-12 ∼ 1.66E-08 | |||||
3.32 Mb | Hapmap49207-BTA-51446 | 7,770,495 | MY,FY,PY,FP,PP | 5.02E-27 ∼ 9.06E-11 | |||||
3.50 Mb | Hapmap36217-SCAFFOLD290026_21689 | 7,954,374 | FY,PY | 7.19E-09 ∼ 7.36E-09 | |||||
3.74 Mb | ARS-BFGL-NGS-27058 | 712,232 | FY,PY,FP | 1.11E-10 ∼ 3.92E-07 | |||||
LMNA | + | Chr3:14695234–14,724,663 | 0.61 Mb | UA-IFASA-8925 | 14,084,731 | PY | 3.48E-07 |